PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_11518
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 253aa    MW: 28285.8 Da    PI: 5.4777
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_11518genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.41.3e-163281255
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                +y GVr+ + +grWvAeI+       ++ r +lg+f+tae+Aa+a+++a+  l+g
  PEQU_11518 32 RYMGVRQSP-SGRWVAEIKG----TtQKIRLWLGTFDTAEQAARAYDEAACLLRG 81
                799******.7******766....1346**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.30E-273188No hitNo description
Gene3DG3DSA:3.30.730.104.8E-263288IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-183289IPR016177DNA-binding domain
PfamPF008475.9E-133281IPR001471AP2/ERF domain
PROSITE profilePS5103218.9663289IPR001471AP2/ERF domain
SMARTSM003803.6E-313295IPR001471AP2/ERF domain
PRINTSPR003679.6E-83344IPR001471AP2/ERF domain
PRINTSPR003679.6E-85571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MRTTKRKHNS KEKMEAFSST ATAATMNQPK KRYMGVRQSP SGRWVAEIKG TTQKIRLWLG  60
TFDTAEQAAR AYDEAACLLR GANTRTNFWP RSASSILPAK VLNRLRSHIE TQREAGAETP  120
SMTDGLASQM GAEPINRMDY SEAMISDVCI SSTAQSGEEN EFGLSFWNTE SVCVHDVRQG  180
KEEEVDKGGV NLAEMWEEQL ACVYAPFEMP VVMEEARRKA EMETYEYWLM LSSAAKDVLV  240
SSSSSSSSSS FLW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54823052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-21related to AP2 11